5VJ7
Ferredoxin NADP Oxidoreductase (Xfn)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-2 |
Synchrotron site | SSRL |
Beamline | BL12-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-06-30 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.95 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 55.743, 73.140, 99.963 |
Unit cell angles | 90.00, 96.73, 90.00 |
Refinement procedure
Resolution | 39.000 - 2.550 |
R-factor | 0.186 |
Rwork | 0.183 |
R-free | 0.25100 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5jfc |
RMSD bond length | 0.010 |
RMSD bond angle | 1.190 |
Data reduction software | HKL-2000 |
Data scaling software | Aimless (0.5.28) |
Phasing software | PHENIX |
Refinement software | BUSTER (2.10.3) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 39.000 | 2.660 |
High resolution limit [Å] | 2.550 | 2.550 |
Rmerge | 0.100 | 0.362 |
Rpim | 0.306 | |
Number of reflections | 25850 | 3147 |
<I/σ(I)> | 7.7 | 2.6 |
Completeness [%] | 98.8 | 99.1 |
Redundancy | 4.2 | 4.2 |
CC(1/2) | 0.934 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 295 | 0.22 Magnesium Sulfate, 27% w/v Polyethylene glycol 3,350, 0.4% v/v Ethyl acetate 1 mM Sodium dithionite |