Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5VIJ

Crystal structure of GluN1/GluN2A NMDA receptor agonist binding domains with glycine and antagonist, 4-bromophenyl-ACEPC

Replaces:  5DDN
Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 19-ID
Synchrotron siteAPS
Beamline19-ID
Temperature [K]100
Detector technologyCCD
Collection date2015-06-12
DetectorADSC QUANTUM 315
Wavelength(s)0.9794
Spacegroup nameP 21 21 21
Unit cell lengths54.886, 87.158, 122.254
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution19.980 - 2.105
R-factor0.1969
Rwork0.193
R-free0.25540
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4nf8
RMSD bond length0.009
RMSD bond angle1.109
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX ((1.10.1_2155: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]19.9802.180
High resolution limit [Å]2.1052.110
Number of reflections340222941
<I/σ(I)>8.781.95
Completeness [%]98.186.4
Redundancy31.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP293Ammonia Acetate, PEG 4000

222036

PDB entries from 2024-07-03

PDB statisticsPDBj update infoContact PDBjnumon