5VGV
Structure of the C. botulinum neurotoxin serotype A with Cu bound
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL9-2 |
Synchrotron site | SSRL |
Beamline | BL9-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-02-04 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.36994 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 49.626, 66.599, 65.548 |
Unit cell angles | 90.00, 98.99, 90.00 |
Refinement procedure
Resolution | 31.965 - 2.600 |
R-factor | 0.2055 |
Rwork | 0.200 |
R-free | 0.25180 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3bok |
RMSD bond length | 0.003 |
RMSD bond angle | 1.057 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.10.1_2155: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 31.965 | 2.693 |
High resolution limit [Å] | 2.600 | 2.600 |
Rmerge | 0.166 | 0.354 |
Number of reflections | 12795 | 1221 |
<I/σ(I)> | 12.32 | 3.92 |
Completeness [%] | 97.0 | 93 |
Redundancy | 7.5 | 5 |
CC(1/2) | 0.980 | 0.889 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 290 | PEG8000 6%, Calcium Acetate 0.1 M, Sodium Cacodylate 0.1 M |