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5VD1

CRYSTAL STRUCTURE OF HUMAN MYT1 KINASE DOMAIN IN COMPLEX WITH PHA-848125

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-ID
Synchrotron siteAPS
Beamline22-ID
Temperature [K]100
Detector technologyCCD
Collection date2016-10-19
DetectorMARMOSAIC 300 mm CCD
Wavelength(s)1.00
Spacegroup nameP 21 21 21
Unit cell lengths46.550, 55.390, 113.810
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution34.008 - 1.700
Rwork0.146
R-free0.19440
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5vcv
RMSD bond length0.012
RMSD bond angle1.405
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX (1.9_1692)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]34.00834.0081.740
High resolution limit [Å]1.7007.6001.700
Rmerge0.0670.0510.307
Rmeas0.0750.0580.347
Number of reflections328904122369
<I/σ(I)>14.0223.64.28
Completeness [%]98.793.697.7
Redundancy4.483.8624.56
CC(1/2)0.9970.9960.910
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.529114 MG/ML MYT1, 50 mM HEPES PH 7.5, 0.5 mM DTT, 0.05 M POTASSIUM CHLORIDE, 17.5 (V/V) % pentaerythritol propoxylate (5/4 PO/OH), 1.5 mM PHA-848125

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