5VBB
Human RNA Pseudouridylate Synthase Domain Containing 1
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 19-ID |
| Synchrotron site | APS |
| Beamline | 19-ID |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2017-02-18 |
| Detector | DECTRIS PILATUS3 X 6M |
| Wavelength(s) | 0.97914 |
| Spacegroup name | C 2 2 21 |
| Unit cell lengths | 55.200, 92.440, 88.890 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 18.520 - 1.940 |
| R-factor | 0.181 |
| Rwork | 0.179 |
| R-free | 0.22400 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.010 |
| RMSD bond angle | 1.080 |
| Data reduction software | DENZO |
| Data scaling software | HKL-3000 |
| Phasing software | BALBES |
| Refinement software | BUSTER (2.10.2) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 50.000 | 1.970 |
| High resolution limit [Å] | 1.940 | 5.260 | 1.940 |
| Rmerge | 0.083 | 0.056 | 0.809 |
| Rmeas | 0.087 | 0.059 | 0.858 |
| Rpim | 0.027 | 0.019 | 0.277 |
| Total number of observations | 166822 | ||
| Number of reflections | 17148 | ||
| <I/σ(I)> | 5.1 | ||
| Completeness [%] | 99.4 | 98.9 | 96.7 |
| Redundancy | 9.7 | 9.3 | 8.3 |
| CC(1/2) | 0.999 | 0.873 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 291 | 21% PEG 3350, 0.2 M LiSO4, 0.1 M BisTris pH6.5 |






