5V9Z
RNA hairpin structure containing 2-MeImpG analogue bound
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.2.2 |
Synchrotron site | ALS |
Beamline | 8.2.2 |
Temperature [K] | 99 |
Detector technology | CCD |
Collection date | 2016-01-26 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 1 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 45.275, 45.275, 154.573 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 43.450 - 2.510 |
R-factor | 0.22161 |
Rwork | 0.218 |
R-free | 0.28106 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4fnj |
RMSD bond length | 0.013 |
RMSD bond angle | 2.438 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER (3.1) |
Refinement software | REFMAC (5.8.0135) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.590 |
High resolution limit [Å] | 2.500 | 2.500 |
Rmerge | 0.100 | 0.710 |
Number of reflections | 5769 | 418 |
<I/σ(I)> | 16.3 | 1.7 |
Completeness [%] | 95.4 | 73.1 |
Redundancy | 10.6 | 7.2 |
CC(1/2) | 0.976 | 0.912 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 291 | 50 mM MgCl2, 3 M ammonia sulfate, 100 mM HEPES 7.5 |