5V9G
Structure of the H477R variant of rat cytosolic PEPCK in complex with oxalate and GTP.
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | ROTATING ANODE |
| Source details | RIGAKU |
| Temperature [K] | 100 |
| Detector technology | IMAGE PLATE |
| Collection date | 2013-05-14 |
| Detector | RIGAKU RAXIS IV++ |
| Wavelength(s) | 1.54 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 46.526, 119.605, 60.679 |
| Unit cell angles | 90.00, 106.83, 90.00 |
Refinement procedure
| Resolution | 28.370 - 1.950 |
| R-factor | 0.1857 |
| Rwork | 0.184 |
| R-free | 0.21240 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 3dt4 |
| RMSD bond length | 0.008 |
| RMSD bond angle | 1.292 |
| Data reduction software | HKL-2000 |
| Data scaling software | SCALEPACK |
| Phasing software | MOLREP |
| Refinement software | REFMAC |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 100.000 | 100.000 | 2.020 |
| High resolution limit [Å] | 1.950 | 4.200 | 1.950 |
| Rmerge | 0.106 | 0.073 | 0.556 |
| Total number of observations | 240871 | ||
| Number of reflections | 45590 | ||
| <I/σ(I)> | 17.8 | ||
| Completeness [%] | 98.5 | 99.2 | 88.9 |
| Redundancy | 5.3 | 5.9 | 2.9 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 7.4 | 298 | 24 - 34% PEG 3350 and 100mM HEPES, at pH 7.4 |
