5V6Z
Crystal structure of human caspase-7 soaked with allosteric inhibitor 2-{[2-(4-chlorophenyl)-2-oxoethyl]sulfanyl}benzoic acid
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 4.2.2 |
Synchrotron site | ALS |
Beamline | 4.2.2 |
Temperature [K] | 100 |
Detector technology | CMOS |
Collection date | 2015-08-20 |
Detector | RDI CMOS_8M |
Wavelength(s) | 0.976250 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 89.344, 89.344, 184.898 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 59.335 - 2.600 |
R-factor | 0.2069 |
Rwork | 0.204 |
R-free | 0.24890 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1f1j |
RMSD bond length | 0.012 |
RMSD bond angle | 1.482 |
Data reduction software | XDS (2016/01/11) |
Data scaling software | SCALA (3.3.22) |
Phasing software | PHASER (2.5.7) |
Refinement software | PHENIX ((1.11.1_2575)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 59.340 | 2.740 |
High resolution limit [Å] | 2.600 | 2.600 |
Rmerge | 0.073 | 1.228 |
Rpim | 0.034 | 0.596 |
Number of reflections | 27055 | 3870 |
<I/σ(I)> | 23.3 | 2 |
Completeness [%] | 100.0 | 100 |
Redundancy | 10.4 | 10 |
CC(1/2) | 0.999 | 0.804 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.7 | 295 | 1.9 M sodium formate, 0.1 M sodium citrate, pH 5.0-5.7 |