Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5V5X

Protocadherin gammaB7 EC3-6 cis-dimer structure

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-C
Synchrotron siteAPS
Beamline24-ID-C
Temperature [K]100
Detector technologyPIXEL
Collection date2016-10-21
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)0.97910
Spacegroup nameP 21 21 21
Unit cell lengths68.242, 91.762, 452.991
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution19.962 - 3.500
R-factor0.2103
Rwork0.208
R-free0.25670
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5szr
RMSD bond length0.003
RMSD bond angle0.553
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX ((1.11.1_2575: ???))
Data quality characteristics
 Overall
Low resolution limit [Å]20.000
High resolution limit [Å]3.500
Rmerge0.161
Number of reflections36143
<I/σ(I)>6.8
Completeness [%]98.0
Redundancy3.2
CC(1/2)0.990
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1BATCH MODE7.529520% ethylene glycol, 10% PEG8000, 10% Morpheus amino acids additive (Molecular Dimensions), and 0.1M Morpheus Buffer System 2 (HEPES/MOPS buffer, Molecular Dimensions) pH 7.5.

227111

PDB entries from 2024-11-06

PDB statisticsPDBj update infoContact PDBjnumon