5V5X
Protocadherin gammaB7 EC3-6 cis-dimer structure
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-10-21 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.97910 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 68.242, 91.762, 452.991 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 19.962 - 3.500 |
R-factor | 0.2103 |
Rwork | 0.208 |
R-free | 0.25670 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5szr |
RMSD bond length | 0.003 |
RMSD bond angle | 0.553 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.11.1_2575: ???)) |
Data quality characteristics
Overall | |
Low resolution limit [Å] | 20.000 |
High resolution limit [Å] | 3.500 |
Rmerge | 0.161 |
Number of reflections | 36143 |
<I/σ(I)> | 6.8 |
Completeness [%] | 98.0 |
Redundancy | 3.2 |
CC(1/2) | 0.990 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | BATCH MODE | 7.5 | 295 | 20% ethylene glycol, 10% PEG8000, 10% Morpheus amino acids additive (Molecular Dimensions), and 0.1M Morpheus Buffer System 2 (HEPES/MOPS buffer, Molecular Dimensions) pH 7.5. |