5V5L
Crystal structure of HLA-B*5801 complex with HIV-1 gag derived peptide TW10
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-10-21 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9792 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 69.148, 85.632, 158.645 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 42.816 - 2.002 |
R-factor | 0.189 |
Rwork | 0.188 |
R-free | 0.21420 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1a1m |
RMSD bond length | 0.004 |
RMSD bond angle | 0.825 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.11.1_2575: ???)) |
Data quality characteristics
Overall | |
Low resolution limit [Å] | 50.000 |
High resolution limit [Å] | 2.000 |
Rmerge | 0.070 |
Number of reflections | 63127 |
Completeness [%] | 98.2 |
Redundancy | 6.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 290 | 15-20% w/v PEG 4000, 20% w/v 2-propanol, 0.1 M MES pH 6.5 |