5V4G
Ruthenium(II)(cymene)(chlorido)2-lysozyme adduct with two binding sites
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX1 |
Synchrotron site | Australian Synchrotron |
Beamline | MX1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-06-10 |
Detector | ADSC QUANTUM 210r |
Wavelength(s) | 0.9537 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 80.282, 80.282, 36.928 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 56.770 - 1.200 |
R-factor | 0.1781 |
Rwork | 0.177 |
R-free | 0.20600 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4nhi |
RMSD bond length | 0.010 |
RMSD bond angle | 1.494 |
Data reduction software | XDS (Oct 15, 2015) |
Data scaling software | Aimless (0.5.24) |
Phasing software | PHASER (2.6.1) |
Refinement software | REFMAC (5.8.0135) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 56.770 | 40.140 | 1.220 |
High resolution limit [Å] | 1.200 | 6.570 | 1.200 |
Rmerge | 0.079 | 0.046 | 2.404 |
Rmeas | 0.082 | 0.049 | 2.520 |
Rpim | 0.022 | 0.014 | 0.736 |
Number of reflections | 38333 | 1851 | |
<I/σ(I)> | 16.2 | ||
Completeness [%] | 99.9 | 99.8 | 98.9 |
Redundancy | 14 | 11.1 | 11 |
CC(1/2) | 0.999 | 0.997 | 0.362 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.7 | 294 | 100mg/mL hen egg white lysozyme, 0.8 M NaCl, 0.1 M sodium acetate pH 4.7 |