5V3Y
Crystal Structure of Mtb Pks13 Thioesterase domain in complex with inhibitor TAM16
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-02-21 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.979 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 89.627, 108.762, 56.735 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 34.584 - 1.980 |
R-factor | 0.1959 |
Rwork | 0.194 |
R-free | 0.23860 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5v3w |
RMSD bond length | 0.007 |
RMSD bond angle | 1.085 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHENIX |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.930 |
High resolution limit [Å] | 1.900 | 5.160 | 1.900 |
Rmerge | 0.147 | 0.066 | 0.907 |
Rmeas | 0.150 | 0.072 | |
Rpim | 0.072 | 0.029 | 0.501 |
Number of reflections | 41704 | ||
<I/σ(I)> | 5.7 | ||
Completeness [%] | 94.1 | 99.2 | 86.5 |
Redundancy | 6.7 | 6.3 | 4 |
CC(1/2) | 0.996 | 0.782 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 290 | 0.1 M Tris-HCl, 2.0-1.8 M ammonium sulfate, 2%-5% v/v PPG P400 |