5V2U
Ethylene forming enzyme apo form
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-F |
Synchrotron site | APS |
Beamline | 21-ID-F |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-12-18 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.9787 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 42.968, 86.833, 91.823 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 43.416 - 2.058 |
R-factor | 0.1883 |
Rwork | 0.186 |
R-free | 0.24510 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5v2t |
RMSD bond length | 0.003 |
RMSD bond angle | 0.616 |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.29) |
Phasing software | PHASER (2.7.16) |
Refinement software | PHENIX (1.11.1-2575) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 45.910 | 45.910 | 2.110 |
High resolution limit [Å] | 2.058 | 8.970 | 2.058 |
Rmerge | 0.141 | 0.052 | 0.496 |
Rmeas | 0.164 | 0.063 | 0.577 |
Rpim | 0.081 | 0.036 | 0.288 |
Number of reflections | 21539 | ||
<I/σ(I)> | 9.6 | ||
Completeness [%] | 98.1 | 94.1 | 98.2 |
Redundancy | 3.7 | 3 | 3.6 |
CC(1/2) | 0.989 | 0.982 | 0.778 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 277.15 | 0.5 ul 72 mg/ml EFE (25 mM HEPES pH 8.0, 1 mM TCEP) was mixed with 0.5 ul reservoir solution. The sitting drop reservoir of 200 ul contained 0.2 M lithium chloride, 0.1 M Tris-HCl pH 8.0, 20% w/v Polyethylene glycol 6,000. The crystal was direcly frozen. |