5V28
2.72 angstrom crystal structure of P97A 3-hydroxyanthranilate-3,4-dioxygenase from Cupriavidus metallidurans
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2013-07-07 |
Detector | MAR scanner 300 mm plate |
Wavelength(s) | 1 |
Spacegroup name | P 65 2 2 |
Unit cell lengths | 58.602, 58.602, 231.523 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 34.206 - 2.724 |
R-factor | 0.1956 |
Rwork | 0.192 |
R-free | 0.26180 |
RMSD bond length | 0.010 |
RMSD bond angle | 1.095 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHENIX |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.820 |
High resolution limit [Å] | 2.720 | 5.860 | 2.720 |
Rmerge | 0.187 | 0.112 | 0.514 |
Rmeas | 0.191 | 0.114 | 0.560 |
Rpim | 0.036 | 0.022 | 0.207 |
Total number of observations | 145783 | ||
Number of reflections | 6174 | ||
<I/σ(I)> | 5 | ||
Completeness [%] | 87.9 | 99 | 36.6 |
Redundancy | 23.6 | 27.6 | 4.6 |
CC(1/2) | 0.999 | 0.828 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 289 | 100 mM Tris-HCl, 200 mM MgCl2, 20% PEG 8000, and 1 mM DTT, pH 8.0 |