5V0M
SeMet crystal structure of the Neisseria meningitidis non-core minor pilin PilV in the monoclinic form
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-2 |
Synchrotron site | SSRL |
Beamline | BL12-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-02-02 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.96859 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 46.320, 21.800, 83.830 |
Unit cell angles | 90.00, 104.24, 90.00 |
Refinement procedure
Resolution | 27.084 - 1.407 |
R-factor | 0.1741 |
Rwork | 0.172 |
R-free | 0.20640 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5v23 |
RMSD bond length | 0.009 |
RMSD bond angle | 1.024 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.10.1_2155: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 40.630 | 1.430 |
High resolution limit [Å] | 1.407 | 1.410 |
Rmerge | 0.098 | 0.819 |
Rpim | 0.043 | 0.359 |
Number of reflections | 15424 | |
<I/σ(I)> | 12.2 | 4 |
Completeness [%] | 95.9 | 97 |
Redundancy | 5.9 | 6 |
CC(1/2) | 0.997 | 0.843 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5 | 293 | 100 mM Sodium Acetate pH 5, 100 mM ammonium chloride, 28 % w/v PEG 8000 |