Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5UYD

YfeA from M9 minimal media supplemented with zinc - Zn wavelength

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsCLSI BEAMLINE 08ID-1
Synchrotron siteCLSI
Beamline08ID-1
Temperature [K]100
Detector technologyCCD
Collection date2017-01-10
DetectorRAYONIX MX-300
Wavelength(s)1.28215
Spacegroup nameP 21 21 21
Unit cell lengths41.786, 52.174, 112.796
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution39.184 - 1.927
R-factor0.1659
Rwork0.162
R-free0.20110
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5uxs
RMSD bond length0.007
RMSD bond angle0.774
Data reduction softwareHKL-2000 (v712)
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwarePHENIX ((1.11.1_2575: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0001.960
High resolution limit [Å]1.9271.927
Rmerge0.0960.426
Rpim0.0380.169
Number of reflections19305937
<I/σ(I)>54.86.4
Completeness [%]99.999.9
Redundancy7.27.2
CC(1/2)0.9950.937
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION6.3293.1530% PEG 4000, 20mM Bis-tris propane, 50mM sodium chloride, 0.05% sodium azide

224201

PDB entries from 2024-08-28

PDB statisticsPDBj update infoContact PDBjnumon