5UY7
Crystal structure of a peptidoglycan glycosyltransferase from Burkholderia ambifaria
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU FR-E+ SUPERBRIGHT |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-02-15 |
Detector | RIGAKU SATURN 944+ |
Wavelength(s) | 1.5418 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 68.800, 74.310, 137.170 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 40.658 - 1.650 |
R-factor | 0.1602 |
Rwork | 0.159 |
R-free | 0.18660 |
Structure solution method | SAD |
RMSD bond length | 0.005 |
RMSD bond angle | 0.773 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 40.658 | 40.658 | 1.690 |
High resolution limit [Å] | 1.650 | 7.380 | 1.650 |
Rmerge | 0.059 | 0.046 | 0.461 |
Rmeas | 0.064 | 0.050 | 0.495 |
Number of reflections | 42618 | 526 | 3131 |
<I/σ(I)> | 19.47 | 36.26 | 3.92 |
Completeness [%] | 99.9 | 97.4 | 99.7 |
Redundancy | 7.396 | 6.437 | 7.427 |
CC(1/2) | 0.998 | 0.996 | 0.917 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | BuamA.10647.a.B2.PS37954 at 23.88 mg/mL against MCSG1 screen condition E5 0.1 M MES pH 6.5, 1.6 M MgSO4, crystal tracking ID 282706e5 |