Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5UVD

Crystal structure of an antigenic nucleotidyltransferase-like protein from Paracoccidioides brasiliensis

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsLNLS BEAMLINE W01B-MX2
Synchrotron siteLNLS
BeamlineW01B-MX2
Temperature [K]100
Detector technologyPIXEL
Collection date2013-05-24
DetectorDECTRIS PILATUS 2M
Wavelength(s)1.4587
Spacegroup nameP 21 21 21
Unit cell lengths33.649, 51.105, 121.190
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution47.090 - 1.860
R-factor0.16216
Rwork0.159
R-free0.22168
Structure solution methodSAD
RMSD bond length0.020
RMSD bond angle1.878
Data scaling softwareXDS (January 10, 2014 BUILT=20140307)
Phasing softwareAutoSol (1.8.2)
Refinement softwareREFMAC (5.8.0135)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]47.0901.9701.710
High resolution limit [Å]1.8601.8601.680
Rmerge0.0880.4090.172
Number of reflections1789426131586
<I/σ(I)>19.24.23.7
Completeness [%]97.989.968.9
Redundancy9.55.51.7
CC(1/2)0.9980.954
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP293.150.25 M MgCl2, 25% PEG 4000, 0.1 M Tris-HCl pH 7.0 - 8,0
2VAPOR DIFFUSION, HANGING DROP293.150.25 M MgCl2, 25% PEG 4000, 0.1 M Tris-HCl pH 7.0 - 8,0 Crystal was incubated in a cryo-soaking solution containing 100 mM NaI and 10% (v/v) ethylene glycol

225946

PDB entries from 2024-10-09

PDB statisticsPDBj update infoContact PDBjnumon