5UTT
SrtA sortase from Actinomyces oris
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-BM |
Synchrotron site | APS |
Beamline | 19-BM |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-02-02 |
Detector | ADSC QUANTUM 210r |
Wavelength(s) | 0.9792 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 62.183, 75.085, 77.652 |
Unit cell angles | 90.00, 89.96, 90.00 |
Refinement procedure
Resolution | 37.540 - 1.700 |
R-factor | 0.16202 |
Rwork | 0.160 |
R-free | 0.20454 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5cuw |
RMSD bond length | 0.012 |
RMSD bond angle | 1.422 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | HKL-3000 |
Refinement software | REFMAC (5.8.0069) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 37.540 | 50.000 | 1.730 |
High resolution limit [Å] | 1.700 | 4.610 | 1.700 |
Rmerge | 0.078 | 0.044 | 0.619 |
Rmeas | 0.092 | 0.052 | 0.742 |
Rpim | 0.048 | 0.027 | 0.404 |
Number of reflections | 74465 | 2941 | |
<I/σ(I)> | 10.6 | 1.92 | |
Completeness [%] | 94.9 | 98.2 | 75.3 |
Redundancy | 3.6 | 3.7 | 2.8 |
CC(1/2) | 0.997 | 0.801 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.6 | 289 | 25% PEG 3350, 0.2 M magnesium chloride, 0.1 M Bis-Tris:HCl buffer |