5UTP
Crystal structure of Burkholderia cenocepacia family 3 glycoside hydrolase (NagZ) bound to N-ethylbutyryl-PUGNAc
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2013-09-25 |
Detector | RIGAKU RAXIS IV++ |
Wavelength(s) | 1.5418 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 51.210, 85.890, 65.610 |
Unit cell angles | 90.00, 102.79, 90.00 |
Refinement procedure
Resolution | 25.230 - 2.200 |
Rwork | 0.175 |
R-free | 0.22580 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4g6c |
RMSD bond length | 0.002 |
RMSD bond angle | 0.623 |
Data reduction software | iMOSFLM |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((dev_2236)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.940 | 2.270 |
High resolution limit [Å] | 2.200 | 2.200 |
Rmerge | 0.137 | 0.249 |
Number of reflections | 27671 | 2380 |
<I/σ(I)> | 5.1 | 3.1 |
Completeness [%] | 98.2 | 98 |
Redundancy | 2.9 | 2.8 |
CC(1/2) | 0.950 | 0.908 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 30-32% PEG8000, 0.1 M MES, pH 6.2-6.8 |