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5UR6

PYR1 bound to the rationally designed agonist cyanabactin

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2016-11-30
DetectorRIGAKU RAXIS IV++
Wavelength(s)1.54178
Spacegroup nameF 2 2 2
Unit cell lengths83.436, 88.222, 112.072
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution34.660 - 1.631
R-factor0.1894
Rwork0.187
R-free0.21880
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)PYR1 (PDB ID 5UR4)
RMSD bond length0.005
RMSD bond angle0.813
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000 (708c)
Phasing softwarePHASER (2.5.5)
Refinement softwarePHENIX (1.12_2829)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0001.660
High resolution limit [Å]1.6304.4201.630
Rmerge0.0520.0430.117
Rmeas0.0570.0460.127
Rpim0.0220.0180.049
Number of reflections25599
<I/σ(I)>63
Completeness [%]99.198.6100
Redundancy6.776.6
CC(1/2)0.9980.987
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.53020.1 M Bis-tris propane, 2 M ammonium sulphate. Cryoprotected in perfluoropolyether cryo-oil

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