5ULU
Crystal Structure of Mouse Cadherin-23 EC19-21 (S2087P) with non-syndromic deafness (DFNB12) associated mutation D2148N
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-07-10 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.9791 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 84.238, 65.386, 114.651 |
Unit cell angles | 90.00, 98.62, 90.00 |
Refinement procedure
Resolution | 30.337 - 2.850 |
R-factor | 0.19771 |
Rwork | 0.195 |
R-free | 0.24429 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5i8d |
RMSD bond length | 0.011 |
RMSD bond angle | 1.456 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.900 |
High resolution limit [Å] | 2.850 | 2.850 |
Rmerge | 0.068 | 0.181 |
Rmeas | 0.081 | 0.224 |
Rpim | 0.044 | 0.130 |
Number of reflections | 14561 | 556 |
<I/σ(I)> | 15.74 | 3.375 |
Completeness [%] | 95.7 | 77.3 |
Redundancy | 3.1 | 2.3 |
CC(1/2) | 0.970 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 277 | 0.1 M Tris pH 8.5 0.05M MgCl2 25% MPD |