5UL2
Structure of Apo, SeMet-labeled Cobalamin-dependent S-adenosylmethionine radical enzyme OxsB
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-04-21 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9793 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 94.392, 106.917, 117.494 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 39.539 - 2.552 |
R-factor | 0.1896 |
Rwork | 0.187 |
R-free | 0.22780 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | SIRAS solved structure of apo-SeMet OxsB |
RMSD bond length | 0.002 |
RMSD bond angle | 0.464 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.11.1_2575) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.640 |
High resolution limit [Å] | 2.550 | 2.550 |
Rmerge | 0.097 | 0.600 |
Number of reflections | 39020 | 3822 |
<I/σ(I)> | 15.4 | 2.7 |
Completeness [%] | 99.8 | 99.2 |
Redundancy | 6.5 | 6.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.6 | 298 | 0.1 M Bicine (pH 7.6), 10% w/v PEG 1500, 20% v/v ethylene glycol |