5UIB
Crystal Structure of an Oxidoreductase from Agrobacterium radiobacter in Complex with NAD+, L-tartaric acid and Magnesium
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 31-ID |
Synchrotron site | APS |
Beamline | 31-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-10-19 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.97931 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 138.622, 113.109, 65.820 |
Unit cell angles | 90.00, 94.61, 90.00 |
Refinement procedure
Resolution | 26.600 - 2.650 |
R-factor | 0.20594 |
Rwork | 0.204 |
R-free | 0.23881 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5uhw |
RMSD bond length | 0.008 |
RMSD bond angle | 1.268 |
Data reduction software | MOSFLM |
Data scaling software | Aimless (0.5.21) |
Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 29.600 | 2.790 |
High resolution limit [Å] | 2.650 | 2.650 |
Rmerge | 0.099 | 0.827 |
Rmeas | 0.137 | 1.134 |
Rpim | 0.094 | 0.772 |
Number of reflections | 29362 | 4299 |
<I/σ(I)> | 5.5 | 1.1 |
Completeness [%] | 99.4 | 99.9 |
Redundancy | 3.8 | 3.8 |
CC(1/2) | 0.994 | 0.538 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 293 | 3.5 M Sodium formate, 5 mM NAD+, 5 mM magnesium chloride |