5UHD
Crystal structure of Mycobacterium tuberculosis transcription initiation complex containing 4nt RNA in complex with Rifampin
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-06-16 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 152.079, 163.099, 197.904 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.476 - 4.010 |
R-factor | 0.2138 |
Rwork | 0.211 |
R-free | 0.26440 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4g7h |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 4.140 |
High resolution limit [Å] | 4.000 | 8.600 | 4.000 |
Rmerge | 0.096 | 0.045 | 0.875 |
Rmeas | 0.101 | 0.047 | 0.931 |
Rpim | 0.030 | 0.013 | 0.312 |
Total number of observations | 464751 | ||
Number of reflections | 41864 | ||
<I/σ(I)> | 5.7 | ||
Completeness [%] | 99.8 | 99.9 | 98.6 |
Redundancy | 11.1 | 12 | 8.2 |
CC(1/2) | 0.998 | 0.413 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 295 | 50 mM Tris-HCl, pH 8.2, 200 mM KCl, 50 mM MgCl2, and 10% PEG3350 |