5UFT
Crystal Structure of a Nitrogen-fixing NifU-like protein (N-terminal) from Brucella abortus
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-G |
Synchrotron site | APS |
Beamline | 21-ID-G |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-11-17 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.97856 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 42.960, 42.960, 149.310 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 29.799 - 2.350 |
R-factor | 0.228 |
Rwork | 0.225 |
R-free | 0.25940 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2qq4 |
RMSD bond length | 0.002 |
RMSD bond angle | 0.422 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MR-Rosetta |
Refinement software | PHENIX (dev_2621) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 29.799 | 29.799 | 2.410 |
High resolution limit [Å] | 2.350 | 10.510 | 2.350 |
Rmerge | 0.045 | 0.023 | 0.558 |
Number of reflections | 7179 | ||
<I/σ(I)> | 23.28 | 43.26 | 3.61 |
Completeness [%] | 99.8 | 89.4 | 100 |
Redundancy | 6.88 | 4.731 | 7.218 |
CC(1/2) | 1.000 | 0.999 | 0.900 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 290 | BrabA.17776.a.A1.PB00075 at 15 mg/ml mixed 1:1 with an equal volume CSHT (b10): 30% (w/v) PEG-4000, 0.1 M Tris-HCl, pH=8.5, 0.2 M sodium acetate hydrate, cryoprotected with 20% ethylene glycol |