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5UFB

Crystal Structure of Variable Lymphocyte Receptor (VLR) Tn4-22 (Apo)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL12-2
Synchrotron siteSSRL
BeamlineBL12-2
Temperature [K]100
Detector technologyPIXEL
Collection date2015-04-16
DetectorDECTRIS PILATUS 6M
Wavelength(s)1.03320
Spacegroup nameI 41
Unit cell lengths83.688, 83.688, 115.073
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution41.844 - 1.844
R-factor0.2068
Rwork0.206
R-free0.21310
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3e6j
RMSD bond length0.007
RMSD bond angle1.024
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHASER
Refinement softwarePHENIX (1.9_1692)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]41.8441.910
High resolution limit [Å]1.8441.844
Rpim0.0300.410
Number of reflections33959
<I/σ(I)>15.1
Completeness [%]100.0
Redundancy6.6
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP29321.6 mg/mL Tn4-22, 100 mM sodium acetate, pH 4.6, 200 mM lithium sulfate, 2.7 M sodium chloride

220113

PDB entries from 2024-05-22

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