5UDN
Phage-associated cell wall hydrolase PlyPy from Streptococcus pyogenes, space group P3121
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.3 |
Synchrotron site | ALS |
Beamline | 5.0.3 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-09-11 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.976484 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 122.130, 122.130, 89.430 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 68.291 - 1.971 |
R-factor | 0.2012 |
Rwork | 0.200 |
R-free | 0.22380 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5udm |
RMSD bond length | 0.006 |
RMSD bond angle | 0.778 |
Data reduction software | XDS (VERSION May 1, 2016 BUILT=20160617) |
Data scaling software | XSCALE (VERSION May 1, 2016 BUILT=20160617) |
Phasing software | PHASER (2.7.17) |
Refinement software | PHENIX (dev_2481) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 68.291 | 68.291 | 2.020 |
High resolution limit [Å] | 1.970 | 8.810 | 1.970 |
Rmerge | 0.114 | 0.020 | 1.110 |
Number of reflections | 54321 | ||
<I/σ(I)> | 13.47 | 56.73 | 1.64 |
Completeness [%] | 99.6 | 99.1 | 99.8 |
Redundancy | 5.52 | 5.108 | 5.563 |
CC(1/2) | 0.998 | 0.999 | 0.606 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.5 | 294 | 0.1M acetate PH 4.5, 1.0M ammonium hydrogen phosphate |