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5U4S

Crystal structure of a Short chain dehydrogenase from Burkholderia cenocepacia J2315 in complex with NADP.

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-G
Synchrotron siteAPS
Beamline21-ID-G
Temperature [K]100
Detector technologyCCD
Collection date2016-11-29
DetectorRAYONIX MX-300
Wavelength(s)0.97856
Spacegroup nameP 21 21 21
Unit cell lengths39.270, 75.660, 146.010
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution50.000 - 1.400
R-factor0.1487
Rwork0.148
R-free0.16620
Structure solution methodSAD
RMSD bond length0.008
RMSD bond angle1.076
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX ((dev_2608))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0001.440
High resolution limit [Å]1.4006.2601.400
Rmerge0.0720.0510.542
Number of reflections86241
<I/σ(I)>13.9128.662.12
Completeness [%]99.598.494.7
Redundancy5.7345.1653.605
CC(1/2)0.9980.9960.753
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP290RigakuReagents JCSG+ screen C6: 40% PEG 300, 100mM Sodium phosphate dibasic / citric acid pH 4.20: BuceA.00010.g.B1.PS01748 at 23.45mg/ml + 5mM NADP: cryo: direct: tray 285429c6, puck izz8-4. For phasing a crystal from the same condition was incubated in reservoir with 10% 5M NaI in EG, with a final concentrations of 10% EG and 500mM NaI, for 30sec and flash frozen. Phasing data were collected at CuKa
1VAPOR DIFFUSION, SITTING DROP290RigakuReagents JCSG+ screen C6: 40% PEG 300, 100mM Sodium phosphate dibasic / citric acid pH 4.20: BuceA.00010.g.B1.PS01748 at 23.45mg/ml + 5mM NADP: cryo: direct: tray 285429c6, puck izz8-4. For phasing a crystal from the same condition was incubated in reservoir with 10% 5M NaI in EG, with a final concentrations of 10% EG and 500mM NaI, for 30sec and flash frozen. Phasing data were collected at CuKa

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