Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5U48

Wild-type Transthyretin in complex with 5-[(1E)-2-(4-Boronic acid)ethenyl]-1,3-benzenediol

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-G
Synchrotron siteAPS
Beamline21-ID-G
Temperature [K]100
Detector technologyCCD
Collection date2015-08-15
DetectorMARMOSAIC 300 mm CCD
Wavelength(s)0.97857
Spacegroup nameP 21 21 2
Unit cell lengths43.228, 84.947, 64.606
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution35.500 - 1.500
R-factor0.1803
Rwork0.178
R-free0.20490
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2qgb
RMSD bond length0.007
RMSD bond angle1.046
Data reduction softwareHKL-2000 (2.3.8)
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwarePHENIX (phenix.refine: 1.9_1692)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]35.50050.0001.530
High resolution limit [Å]1.5004.0701.500
Rmerge0.0520.0290.686
Number of reflections390261904
<I/σ(I)>9.2
Completeness [%]99.998.9100
Redundancy7.36.77.3
CC(1/2)0.9990.853
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP5.52981.3 M Sodium Citrate, 3.0% glycerol

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon