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5U1V

Crystal structure of the ATP-gated P2X7 ion channel bound to allosteric antagonist A804598

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsCHESS BEAMLINE F1
Synchrotron siteCHESS
BeamlineF1
Temperature [K]100
Detector technologyPIXEL
Collection date2015-07-10
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.9774
Spacegroup nameI 21 3
Unit cell lengths170.403, 170.403, 170.403
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution49.191 - 3.400
R-factor0.2526
Rwork0.250
R-free0.27250
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)A740003 bound P2X7
RMSD bond length0.003
RMSD bond angle0.696
Data scaling softwareAimless (0.5.1)
Phasing softwarePHASER
Refinement softwarePHENIX ((1.10_2155: ???))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]49.19049.1903.670
High resolution limit [Å]3.4009.0003.400
Rmerge0.1510.0721.267
Rmeas0.160
Rpim0.051
Total number of observations115474
Number of reflections11482
<I/σ(I)>11
Completeness [%]99.999.399.7
Redundancy10.19.410
CC(1/2)0.9980.9980.675
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP277100 mM HEPES or Tris (pH 6.0-7.5), 100 mM NaCl, 4% ethylene glycol, 15% glycerol, 27-32% PEG-400 or 31-36% PEG-300, 0.1 mg/mL lipid mixture (60% POPE, 20% POPG, and 20% cholesterol), and 1 mM A804598

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PDB entries from 2024-09-04

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