5U13
E. coli dihydropteroate synthase complexed with an 8-mercaptoguanine derivative: 2-amino-8-{[2-(4-methoxyphenyl)-2-oxoethyl]sulfanyl}-1,7-dihydro-6H-purin-6-one
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-04-28 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.95370 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 95.881, 84.803, 84.223 |
Unit cell angles | 90.00, 110.47, 90.00 |
Refinement procedure
Resolution | 43.758 - 1.951 |
R-factor | 0.1885 |
Rwork | 0.187 |
R-free | 0.21660 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1aj2 |
RMSD bond length | 0.012 |
RMSD bond angle | 1.401 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.10.1_2155: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.676 | 2.000 |
High resolution limit [Å] | 1.951 | 1.951 |
Rmerge | 0.068 | 0.639 |
Number of reflections | 45749 | |
<I/σ(I)> | 18.3 | 2.8 |
Completeness [%] | 99.5 | 98.3 |
Redundancy | 7.4 | 7.4 |
CC(1/2) | 0.999 | 0.896 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.3 | 281 | 0.066M magnesium acetate 17%w/v PEG8000 0.1M sodium cacodylate 6.3 Protein at 11.1 mg.mL-1 Cocrystallisation 1:1 (150:150 nL) reservoir:protein |