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5TZC

Crystal Structure of human PDE2a in complex with (5S)-1-[(3-bromo-4-fluorophenyl)carbonyl]-3,3-difluoro-5-{5-methyl-[1,2,4]triazolo[1,5-a]pyrimidin-7-yl}piperidine

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 5.0.2
Synchrotron siteALS
Beamline5.0.2
Temperature [K]100
Detector technologyCCD
Collection date2013-07-31
DetectorADSC QUANTUM 315r
Wavelength(s)0.9761
Spacegroup nameP 1
Unit cell lengths55.850, 73.437, 91.322
Unit cell angles109.60, 90.90, 91.24
Refinement procedure
Resolution46.810 - 2.360
R-factor0.2025
Rwork0.201
R-free0.24010
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.013
RMSD bond angle1.476
Data reduction softwareDENZO
Data scaling softwareHKL-2000
Phasing softwarePHASER (2.5.2)
Refinement softwareREFMAC (5.7.0029)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.430
High resolution limit [Å]2.3505.0602.350
Rmerge0.1050.0390.397
Rmeas0.144
Rpim0.098
Total number of observations116391
Number of reflections55551
<I/σ(I)>6.1
Completeness [%]98.599.597.6
Redundancy2.12.12.1
CC(1/2)0.9970.767
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.429317-19% PEG3350, 0.2M MgCl2, 0.1M Tris, pH 8.4

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PDB entries from 2024-07-17

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