5TXQ
Crystal structure of the A143D variant of catalase-peroxidase from B. pseudomallei
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | CLSI BEAMLINE 08ID-1 |
Synchrotron site | CLSI |
Beamline | 08ID-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-07-16 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.9795 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 100.670, 115.117, 174.738 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 96.130 - 1.900 |
R-factor | 0.1584 |
Rwork | 0.157 |
R-free | 0.19070 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | PDBID 1MWV |
RMSD bond length | 0.027 |
RMSD bond angle | 2.221 |
Data reduction software | XDS |
Data scaling software | SCALA (3.3.22) |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 96.131 | 48.042 | 2.000 |
High resolution limit [Å] | 1.900 | 6.010 | 1.900 |
Rmerge | 0.022 | 0.563 | |
Rmeas | 0.086 | ||
Rpim | 0.038 | ||
Total number of observations | 791484 | ||
Number of reflections | 159525 | ||
<I/σ(I)> | 17.5 | 27.7 | 1.4 |
Completeness [%] | 99.8 | 99.6 | 99.6 |
Redundancy | 5 | 4.7 | 5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.1 | 293 | 20% MPD, 0.1 M sodium citrate, 17% PEG 4000 |