5TW4
Crystal structure of S. aureus penicillin binding protein 4 (PBP4) mutant (E183A, F241R) in complex with ceftaroline
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | CLSI BEAMLINE 08ID-1 |
Synchrotron site | CLSI |
Beamline | 08ID-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-06-24 |
Detector | RAYONIX MX-300 |
Wavelength(s) | 0.9795 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 115.696, 92.562, 79.592 |
Unit cell angles | 90.00, 99.75, 90.00 |
Refinement procedure
Resolution | 46.280 - 1.570 |
R-factor | 0.1572 |
Rwork | 0.156 |
R-free | 0.17730 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1tvf |
RMSD bond length | 0.008 |
RMSD bond angle | 0.994 |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.17) |
Phasing software | PHASER (2.5.6) |
Refinement software | PHENIX ((1.11.1_2575)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 46.280 | 46.280 | 1.600 |
High resolution limit [Å] | 1.570 | 8.600 | 1.570 |
Rmerge | 0.074 | 0.026 | 1.011 |
Rmeas | 0.086 | ||
Rpim | 0.044 | ||
Total number of observations | 436665 | ||
Number of reflections | 114289 | ||
<I/σ(I)> | 12.6 | ||
Completeness [%] | 99.4 | 98.9 | 98.4 |
Redundancy | 3.8 | 3.6 | 3.8 |
CC(1/2) | 0.999 | 0.998 | 0.625 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5 | 296 | 8 mM Zinc chloride, 80 mM sodium acetate pH 5, 100 mM sodium fluoride, and 16% polyethylene glycol 6000 |