5TV7
2.05 Angstrom Resolution Crystal Structure of Peptidoglycan-Binding Protein from Clostridioides difficile in Complex with Glutamine Hydroxamate.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-F |
Synchrotron site | APS |
Beamline | 21-ID-F |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-06-04 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.97872 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 134.949, 35.008, 101.533 |
Unit cell angles | 90.00, 126.25, 90.00 |
Refinement procedure
Resolution | 29.080 - 2.050 |
R-factor | 0.17346 |
Rwork | 0.172 |
R-free | 0.21030 |
Structure solution method | SAD |
RMSD bond length | 0.008 |
RMSD bond angle | 1.313 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHENIX |
Refinement software | REFMAC (5.8.0155) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 29.080 | 2.090 |
High resolution limit [Å] | 2.050 | 2.050 |
Rmerge | 0.093 | 0.769 |
Number of reflections | 24487 | |
<I/σ(I)> | 28.1 | 2.06 |
Completeness [%] | 100.0 | 99.9 |
Redundancy | 5 | 5 |
CC(1/2) | 0.769 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 295 | Protein: 7.8 mg/ml, 0.25M Sodium chloride, 0.01M Tris HCl (pH 8.3), Screen: JCSG+ (B3), 0.1M Bicine (pH 8.5), 20% (w/v) PEG 6000. |