5TSB
Crystal structure of the Zrt-/Irt-like protein from Bordetella bronchiseptica with bound Cd2+
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-D |
Synchrotron site | APS |
Beamline | 21-ID-D |
Temperature [K] | 193 |
Detector technology | PIXEL |
Collection date | 2016-10-08 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.97918 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 96.076, 61.596, 54.870 |
Unit cell angles | 90.00, 108.74, 90.00 |
Refinement procedure
Resolution | 26.494 - 2.700 |
R-factor | 0.2286 |
Rwork | 0.227 |
R-free | 0.26750 |
Structure solution method | SAD |
RMSD bond length | 0.011 |
RMSD bond angle | 1.209 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | SOLVE |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 26.494 | 50.000 | 2.800 |
High resolution limit [Å] | 2.700 | 5.810 | 2.700 |
Rmerge | 0.162 | 0.100 | 0.482 |
Rmeas | 0.169 | ||
Rpim | 0.048 | ||
Total number of observations | 79447 | ||
Number of reflections | 7889 | ||
<I/σ(I)> | 4.6 | ||
Completeness [%] | 93.2 | 91.9 | 83.3 |
Redundancy | 10.1 | 12.7 | 4.2 |
CC(1/2) | 0.998 | 0.896 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | LIPIDIC CUBIC PHASE | 7.5 | 294 | protein concentration: 15 mg/mL; buffer: 10 mM Hepes pH 7.3, 300 mM NaCl, 5% Glycerol, 0.02% DDM; crystallization condition: 0.1 M Sodium chloride, 0.1 M Cadmium chloride hemi, 0.1 M Tris-HCl pH 7.5, 33% PEG 400 |