5TKR
Crystal structure of a Lipomyces starkeyi levoglucosan kinase G359R mutant
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL7-1 |
Synchrotron site | SSRL |
Beamline | BL7-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-05-19 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.97947 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 70.060, 70.060, 261.770 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 43.081 - 1.800 |
R-factor | 0.1767 |
Rwork | 0.175 |
R-free | 0.20790 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5bsb |
RMSD bond length | 0.008 |
RMSD bond angle | 0.828 |
Data reduction software | iMOSFLM |
Data scaling software | SCALA |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.10_2155: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.330 | 1.900 |
High resolution limit [Å] | 1.800 | 1.800 |
Rmerge | 0.133 | 1.045 |
Number of reflections | 61638 | |
<I/σ(I)> | 9.4 | 1.7 |
Completeness [%] | 99.9 | 100 |
Redundancy | 6.7 | 6.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 296 | Crystals were grown using the hanging drop vapor-diffusion method by mixing equal volumes of reservoir buffer (22% PEG3350, 0.2 M K2SO4, 100 mM Tris pH 6.8) and LGK (23 mg/ml) in crystallization buffer (50 mM NaCl, 2 mM ADP, 4 mM MgCl2 , 0.5 mM TCEP, 20 mM Tris pH 7.5). |