5TK7
Structure of the HD-domain phosphohydrolase OxsA with Oxetanocin-A triphosphate bound
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-08-23 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9795 |
Spacegroup name | H 3 2 |
Unit cell lengths | 143.031, 143.031, 53.786 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 49.336 - 1.904 |
R-factor | 0.1941 |
Rwork | 0.193 |
R-free | 0.22350 |
RMSD bond length | 0.011 |
RMSD bond angle | 0.934 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.10_2155: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.336 | 1.970 |
High resolution limit [Å] | 1.900 | 1.900 |
Rmerge | 0.054 | 0.803 |
Number of reflections | 16408 | |
<I/σ(I)> | 26.2 | 1.6 |
Completeness [%] | 99.5 | 98.4 |
Redundancy | 4.8 | 3.6 |
CC(1/2) | 0.595 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 293 | 0.1 M TRIS hydrochloride (pH 8.5), 0.2 M magnesium chloride hexahydrate, 30% w/v PEG 400 Soaked in a solution that contained 1 mM OXT-PPP in 30% PEG400 for 2.5 hours |