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5TFW

Crystal structure of 10E8 Fab light chain mutant2 against the MPER region of the HIV-1 Env, in complex with T117v2 epitope scaffold

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 23-ID-B
Synchrotron siteAPS
Beamline23-ID-B
Temperature [K]110
Detector technologyCCD
Collection date2015-07-25
DetectorMARMOSAIC 300 mm CCD
Wavelength(s)1.03320
Spacegroup nameC 1 2 1
Unit cell lengths213.490, 63.410, 53.870
Unit cell angles90.00, 95.79, 90.00
Refinement procedure
Resolution47.235 - 2.168
R-factor0.1721
Rwork0.169
R-free0.22820
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4g6f 3lf6
RMSD bond length0.007
RMSD bond angle0.871
Data reduction softwareXDS (VERSION November 3, 2014)
Data scaling softwareXSCALE (VERSION November 3, 2014 BUILT=20141118)
Phasing softwarePHASER (2.5.2)
Refinement softwarePHENIX ((1.10_2155: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]47.2352.220
High resolution limit [Å]2.1682.168
Rmerge0.635
Number of reflections36138
<I/σ(I)>15.52.1
Completeness [%]94.595.8
Redundancy4.24
CC(1/2)0.9990.835
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION6.9295.150.2 M Na thiocyanate, 20% PEG 3350, pH 6.9, 10% ethylene glycol

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