5TEV
Crystal structure of a tryptophanyl-tRNA synthetase from Neisseria gonorrhoeae, apo
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-F |
Synchrotron site | APS |
Beamline | 21-ID-F |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-08-23 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.97872 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 59.940, 59.940, 355.620 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 44.828 - 2.250 |
R-factor | 0.1784 |
Rwork | 0.175 |
R-free | 0.23680 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3tzl |
RMSD bond length | 0.007 |
RMSD bond angle | 0.792 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | PHENIX ((DEV_2499: ???)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.310 | |
High resolution limit [Å] | 2.250 | 10.060 | 2.250 |
Rmerge | 0.085 | 0.037 | 0.557 |
Number of reflections | 36620 | ||
<I/σ(I)> | 15.42 | 30.6 | 3.49 |
Completeness [%] | 99.7 | 94.9 | 99.9 |
Redundancy | 6.7 | ||
CC(1/2) | 0.998 | 0.999 | 0.889 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 289 | NegoA.00743.a.B1.PS37949 at 19.2 mg/mL against Morpheus screen condition G9 10% PEG 20,000, 20% PEG 550 MME, 0.02 M carboxylates, 0.1 M bicine/trizma pH 8.5 |