5TEE
Crystal structure of Gemin5 WD40 repeats in apo form
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-08-18 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.97918 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 60.811, 124.407, 61.034 |
Unit cell angles | 90.00, 119.49, 90.00 |
Refinement procedure
Resolution | 48.470 - 1.650 |
R-factor | 0.165 |
Rwork | 0.164 |
R-free | 0.19450 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | FFAS03/SCWRL models based on PDB entries 3ow8 2hes 3dm0 |
RMSD bond length | 0.017 |
RMSD bond angle | 1.594 |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.27) |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0155) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 48.710 | 48.710 | 1.680 |
High resolution limit [Å] | 1.650 | 9.040 | 1.650 |
Rmerge | 0.091 | 0.033 | 1.015 |
Rmeas | 0.107 | 0.039 | 1.179 |
Rpim | 0.054 | 0.020 | 0.599 |
Total number of observations | 355460 | 2137 | 17249 |
Number of reflections | 93484 | ||
<I/σ(I)> | 10.8 | 35.9 | 1.3 |
Completeness [%] | 98.9 | 97.7 | 97.8 |
Redundancy | 3.8 | 3.6 | 3.8 |
CC(1/2) | 0.997 | 0.997 | 0.495 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 5.5 | 291 | 15% PEG4000, 0.2M ammonium acetate, 0.1M sodium citrate |