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5TDX

Resurrected Ancestral Hydroxynitrile Lyase from Flowering Plants

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 23-ID-B
Synchrotron siteAPS
Beamline23-ID-B
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2014-10-30
DetectorMAR scanner 300 mm plate
Wavelength(s)1.0332
Spacegroup nameP 43 21 2
Unit cell lengths108.265, 108.265, 201.188
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution29.320 - 1.960
R-factor0.1792
Rwork0.177
R-free0.22650
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1yb6
RMSD bond length0.027
RMSD bond angle2.346
Data reduction softwareXDS
Data scaling softwareAimless (0.3.11)
Phasing softwarePHASER (2.5.1)
Refinement softwareREFMAC (5.8.0155)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]29.3201.990
High resolution limit [Å]1.9601.960
Rmerge0.0970.680
Number of reflections86348
<I/σ(I)>13.8
Completeness [%]99.388.3
Redundancy8.55.8
CC(1/2)0.9980.772
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.82931:1 mix of protein (in 5mM BES buffer) with mother liquor (1.1 Molar Ammonium Citrate, 50 mM bis-tris propane, pH 6.8) Crystals formed after 2-3 weeks at 20 degrees C. Crystals were cryo-protected in 5% glycerol in mother liquor for 10 seconds then flash frozen in LN2.

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