5TC2
C-terminal domain of HIV-1 integrase, crystal structure
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SOLEIL BEAMLINE PROXIMA 1 |
Synchrotron site | SOLEIL |
Beamline | PROXIMA 1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-12-14 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97858 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 25.139, 72.618, 33.893 |
Unit cell angles | 90.00, 106.39, 90.00 |
Refinement procedure
Resolution | 36.310 - 1.840 |
R-factor | 0.219 |
Rwork | 0.218 |
R-free | 0.24000 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1ex4 |
RMSD bond length | 0.008 |
RMSD bond angle | 1.100 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | BUSTER (2.10.2) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 36.310 | 1.880 |
High resolution limit [Å] | 1.840 | 1.840 |
Rmerge | 0.112 | 1.225 |
Rmeas | 0.134 | 1.542 |
Rpim | 0.072 | 0.921 |
Number of reflections | 10034 | |
<I/σ(I)> | 6 | 0.8 |
Completeness [%] | 98.7 | 84.2 |
Redundancy | 3.2 | 2.1 |
CC(1/2) | 0.994 | 0.580 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293.15 | 2.1M di-Sodium DL-malate |