5TA6
Crystal structure of PLK1 in complex with a novel 5,6-dihydroimidazolo[1,5-f]pteridine inhibitor.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.3 |
Synchrotron site | ALS |
Beamline | 5.0.3 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2007-12-11 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.987 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 66.303, 66.303, 153.115 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 45.980 - 2.500 |
R-factor | 0.1827 |
Rwork | 0.179 |
R-free | 0.25980 |
RMSD bond length | 0.007 |
RMSD bond angle | 1.224 |
Data scaling software | SCALEPACK |
Phasing software | MOLREP |
Refinement software | REFMAC (5.7.0025) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.560 |
High resolution limit [Å] | 2.500 | 6.160 | 2.500 |
Rmerge | 0.065 | 0.032 | 0.190 |
Total number of observations | 51213 | ||
Number of reflections | 13099 | ||
<I/σ(I)> | 12 | ||
Completeness [%] | 92.7 | 99.9 | 57.4 |
Redundancy | 3.9 | 3.9 | 3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 277 | 0.95 mM succinic acid, 1.7% PEG2000 MME, 0.4 mM zinc acetate, 100 mM HEPES, pH 7.0, temperature 277K |