Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5SZP

Protocadherin Gamma B7 extracellular cadherin domains 1-4 P21 crystal form

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-C
Synchrotron siteAPS
Beamline24-ID-C
Temperature [K]100
Detector technologyPIXEL
Collection date2016-07-22
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)0.97919
Spacegroup nameP 1 21 1
Unit cell lengths83.813, 45.549, 127.072
Unit cell angles90.00, 96.91, 90.00
Refinement procedure
Resolution19.977 - 3.100
R-factor0.2586
Rwork0.256
R-free0.30980
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5szo
RMSD bond length0.002
RMSD bond angle0.585
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX ((1.10.1_2155: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]39.9503.310
High resolution limit [Å]3.1003.100
Rmerge0.1801.512
Number of reflections17677
<I/σ(I)>5.50.8
Completeness [%]99.599.2
Redundancy3.43.3
CC(1/2)0.9820.585
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1BATCH MODE8.52950.1 M Tris-Cl pH 8.5, 0.2 trimethylamine N-oxide, 5% (v/v) Jeffamine M-600 pH 7.0, 17% (w/v) PEG2000MME

224201

PDB entries from 2024-08-28

PDB statisticsPDBj update infoContact PDBjnumon