5SYD
Circularly permutated azurin (cpAz) based on P. aeruginosa azurin sequence
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X29A |
Synchrotron site | NSLS |
Beamline | X29A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-07-09 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1.075 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 115.436, 115.436, 83.145 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 42.840 - 2.397 |
R-factor | 0.2249 |
Rwork | 0.224 |
R-free | 0.25120 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4azu |
RMSD bond length | 0.005 |
RMSD bond angle | 0.960 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.490 |
High resolution limit [Å] | 2.397 | 5.170 | 2.400 |
Rmerge | 0.100 | 0.070 | 0.674 |
Number of reflections | 25321 | ||
<I/σ(I)> | 11 | ||
Completeness [%] | 99.7 | 100 | 97.9 |
Redundancy | 23.5 | 30.8 | 17.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 277 | 2 uL of 5 mM protein was mixed with equal amount of well buffer (0.1 M Tris, 0.1 M LiNO 3, 0.01 M CUSO 4 with 35% polyethylene glycol 10000), and crystalized using the hanging drop method, with 300 uL well buffer in the crystallization tray. |