Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5SYA

Atomic resolution structure of D24N mutant human DJ-1

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL9-2
Synchrotron siteSSRL
BeamlineBL9-2
Temperature [K]100
Detector technologyPIXEL
Collection date2016-02-24
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.88
Spacegroup nameP 31 2 1
Unit cell lengths74.969, 74.969, 75.336
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution38.000 - 1.100
R-factor0.11387
Rwork0.113
R-free0.12765
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1p5f
RMSD bond length0.015
RMSD bond angle1.699
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0151)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]38.0001.120
High resolution limit [Å]1.1001.100
Rmerge0.0420.919
Number of reflections98874
<I/σ(I)>20.41.8
Completeness [%]99.897.1
Redundancy5.55.4
CC(1/2)1.0000.738
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8.529823-27% polyethylene glycol (PEG) 4000, 0.2 M Sodium Citrate, and 0.1 M Tris HCl

223166

PDB entries from 2024-07-31

PDB statisticsPDBj update infoContact PDBjnumon