5SWA
Crystal structure of N-glycan transport solute binding protein (NgtS) from Streptococcus pneumoniae in complex with Man1GlcNAc
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SSRL BEAMLINE BL9-2 |
| Synchrotron site | SSRL |
| Beamline | BL9-2 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2013-12-09 |
| Detector | MARMOSAIC 325 mm CCD |
| Wavelength(s) | 1.04007 |
| Spacegroup name | P 1 |
| Unit cell lengths | 39.990, 50.470, 107.890 |
| Unit cell angles | 89.17, 89.02, 88.90 |
Refinement procedure
| Resolution | 107.860 - 3.000 |
| R-factor | 0.2294 |
| Rwork | 0.227 |
| R-free | 0.28090 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 5suo |
| RMSD bond length | 0.004 |
| RMSD bond angle | 0.835 |
| Data reduction software | MOSFLM |
| Data scaling software | SCALA |
| Phasing software | PHASER |
| Refinement software | REFMAC |
Data quality characteristics
| Overall | |
| Low resolution limit [Å] | 107.860 |
| High resolution limit [Å] | 3.000 |
| Rmerge | 0.137 |
| Number of reflections | 16399 |
| <I/σ(I)> | 6.6 |
| Completeness [%] | 97.0 |
| Redundancy | 2.2 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 291 | 23 % PEG 3350, 0.18 M sodium bromide, 0.1 M sodium citrate |
