Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5SR9

PanDDA analysis group deposition -- Crystal structure of SARS-CoV-2 NSP3 macrodomain in complex with Z3562259556 - (R) isomer

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 8.3.1
Synchrotron siteALS
Beamline8.3.1
Temperature [K]100
Detector technologyPIXEL
Collection date2021-11-11
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.88557
Spacegroup nameP 43
Unit cell lengths88.691, 88.691, 39.442
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution44.350 - 1.050
R-factor0.1359
Rwork0.135
R-free0.15350
Structure solution methodMOLECULAR REPLACEMENT
Data reduction softwareXDS (Jan 10, 2022)
Data scaling softwareXSCALE
Phasing softwarePHASER (2.8.3)
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]44.35044.3501.120
High resolution limit [Å]1.0503.1501.050
Rmerge0.0490.0340.480
Rmeas0.0540.0370.524
Total number of observations913244
Number of reflections142223551822777
<I/σ(I)>14.7941.222.48
Completeness [%]99.899.999.2
Redundancy6.4216.2386.315
CC(1/2)0.9990.9990.943
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP9.5293100 mM CHES, 28% PEG 3000

219140

PDB entries from 2024-05-01

PDB statisticsPDBj update infoContact PDBjnumon